Package: VAJointSurv 0.1.1

VAJointSurv: Variational Approximation for Joint Survival and Marker Models

Estimates joint marker (longitudinal) and survival (time-to-event) outcomes using variational approximations. The package supports multivariate markers allowing for correlated error terms and multiple types of survival outcomes which may be left-truncated, right-censored, and recurrent. Time-varying fixed and random covariate effects are supported along with non-proportional hazards.

Authors:Benjamin Christoffersen [cre, aut], Mark Clements [aut], Birzhan Akynkozhayev [aut], Antoine Savine [cph]

VAJointSurv_0.1.1.tar.gz
VAJointSurv_0.1.1.zip(r-4.5)VAJointSurv_0.1.1.zip(r-4.4)VAJointSurv_0.1.1.zip(r-4.3)
VAJointSurv_0.1.1.tgz(r-4.4-x86_64)VAJointSurv_0.1.1.tgz(r-4.4-arm64)VAJointSurv_0.1.1.tgz(r-4.3-x86_64)VAJointSurv_0.1.1.tgz(r-4.3-arm64)
VAJointSurv_0.1.1.tar.gz(r-4.5-noble)VAJointSurv_0.1.1.tar.gz(r-4.4-noble)
VAJointSurv_0.1.1.tgz(r-4.4-emscripten)VAJointSurv_0.1.1.tgz(r-4.3-emscripten)
VAJointSurv.pdf |VAJointSurv.html✨
VAJointSurv/json (API)

# Install 'VAJointSurv' in R:
install.packages('VAJointSurv', repos = c('https://boennecd.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/boennecd/vajointsurv/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

openblascppopenmp

5.20 score 5 stars 21 scripts 48 downloads 19 exports 41 dependencies

Last updated 14 days agofrom:65285af526. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 16 2025
R-4.5-win-x86_64OKJan 16 2025
R-4.5-linux-x86_64OKJan 16 2025
R-4.4-win-x86_64OKJan 16 2025
R-4.4-mac-x86_64OKJan 16 2025
R-4.4-mac-aarch64OKJan 16 2025
R-4.3-win-x86_64OKJan 16 2025
R-4.3-mac-x86_64OKJan 16 2025
R-4.3-mac-aarch64OKJan 16 2025

Exports:bs_termjoint_ms_formatjoint_ms_hessjoint_ms_lbjoint_ms_lb_grjoint_ms_optjoint_ms_profilejoint_ms_ptrjoint_ms_set_vcovjoint_ms_start_valjoint_ms_va_parmarker_termns_termplot_markerplot_survpoly_termstacked_termsurv_termweighted_term

Dependencies:bootbriocallrclicrayondescdiffobjdigestevaluatefsgluejsonlitelatticelifecyclelme4magrittrMASSMatrixminqanlmenloptrpkgbuildpkgloadpraiseprocessxpspsqnR6rbibutilsRcppRcppArmadilloRcppEigenRdpackreformulasrlangrprojrootSimSurvNMarkersurvivaltestthatwaldowithr

Joint Survival and Marker Models

Rendered fromVAJointSurv.html.asisusingR.rsp::asison Jan 16 2025.

Last update: 2021-09-08
Started: 2021-09-08